Hi phillypina,
I never used either protocol, I used Dr. Jernigan's protocol and I'm still symptom free after 5 years.
I still continue the detox baths, foot baths, infrared sauna, coffee enemas, etc. simply because I believe we all have toxins from the air we breath, the foods we eat, etc. and I believe that in order to keep my immune system strong and stay healthy, detoxing is necessary as well as diet and exercising.
Why are you concerned? Are you starting to have some symptoms? Remember that the die-off's from lyme bacteria (the toxins) are really good at hiding in one's muscles, the colon and intestines, and so many other area's. Toxins alone can cause symptoms.
Don't know if this helps or not,
Denise