This might shed some light on what might be going on with Iga in germ free mice,or confuse more.
I wont even try to explain it, not sure I understand completely,you will have to read it, quite complex,seems like a time lag between exposure and specific Iga generation,to match dominant microbes,something like that.
Also in this paper it mentions shielding of bacteria by endotoxin,so the body cant figure out what Iga to make,I think I got that right. But there is no overt intestinal alkaline phosphatase in the colon/rectum like there is in the ileum,has to be generated by mRNA and takes time. The alkaline phosphatase breaks down endotoxin. I will put this other paper into my alkaline phosphatase thread.
Old Mike
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923373/
then this one,the bacteria must first penetrate the inner mucus before an immune response is generated
giving the cached version since direct links to plosone don't seem to work right
http://webcache.googleusercontent.com/search?q=cache:v-U-5ipG6I0J:www.plosone.org/article/info%253Adoi%252F10.1371%252Fjournal.pone.0012238+&cd=1&hl=en&ct=clnk&gl=us
also antibiotics are also mentioned in this thread.
Antibiotics thin mucus,lest we forget.
interesting insights on igA and how it might work in the gut
http://journal.frontiersin.org/Journal/10.3389/fimmu.2012.00100/full
Post Edited (Old Mike) : 8/31/2014 10:39:06 AM (GMT-6)